PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P09050_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 316aa    MW: 34119 Da    PI: 8.0053
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P09050_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-10142189455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+ +Er RR+ri +++  L++l+P +    sk   Ka +L + ++Y++sLq
  GSMUA_Achr6P09050_001 142 SHSLAERVRRERISQRMKYLQDLVPGC----SKITGKAGMLDEIINYVQSLQ 189
                            8**************************....899*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.04E-11136193No hitNo description
SuperFamilySSF474592.36E-16136205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-16138200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.345138188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-7142189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.1E-9144194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MQTSFQALPS GCGGEKNANH GDVHGSIDCF SNGWPDLANI RYPVHGAANV EETSITNVSS  60
NSSRKRKADK SPRSKEKENG GGGKGDSSCK RIKEETGGGA TSETGQPNKK EAASGDASKK  120
NDKPPKTDCI HVRARRGQAT DSHSLAERVR RERISQRMKY LQDLVPGCSK ITGKAGMLDE  180
IINYVQSLQR QVEFLSMKLA TASPLMDINI DNIFGREINP SCKSGSTAMI GMSSELLDQS  240
YLRFDSLQHP HPCSGLDTFM DSSDLVLRQN VNPPVAVPDA SFGSSFDVNG CSVWSTNLQS  300
LYGVDFQQGR GAALPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009403911.10.0PREDICTED: transcription factor bHLH63-like isoform X3
SwissprotQ8GY611e-52BH063_ARATH; Transcription factor bHLH63
TrEMBLM0T5F40.0M0T5F4_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P09050_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82523749
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-53cryptochrome-interacting basic-helix-loop-helix 1